This post may contain affiliate links, please read my disclosure policy for details.
Bright, soft, and perfectly moist, these Blueberry Lemon Muffins with Greek Yogurt are bursting with fresh lemon flavor and juicy blueberries in every bite. Made with simple ingredients and a boost of protein from Greek yogurt, they’re an easy, nourishing muffin you’ll love for breakfast or a cozy afternoon treat.

In this season of life, I find myself reaching for simple, nourishing recipes that make our home feel calm and cared for—and muffins are always one of those little comforts. Between slow mornings, homeschooling at the table, and afternoons in the kitchen with my boys nearby, I wanted something I could bake once and have sitting on the counter, ready for breakfast or a cozy snack.
These Blueberry Lemon Muffins with Greek Yogurt came from that desire for something fresh, simple, and a little more nourishing. The Greek yogurt adds a boost of protein and keeps them so soft, while the lemon and blueberries bring that bright, homemade goodness that just feels like sunshine in the kitchen. They’re the kind of recipe that fits right into our everyday rhythm- and those are always my favorite to share.
Why You’ll Love These Blueberry Lemon Muffins
Ingredients You’ll Need

How to Make Blueberry Lemon Muffins
Please see the recipe card at the bottom of this post for the full recipe details.
1. Prep the oven and muffin pan
Preheat your oven to 375°F and line a 12-cup muffin pan with paper liners, or lightly grease the pan.

2. Mix the dry ingredients
In a large mixing bowl, whisk together the flour, sugar, baking powder, baking soda, and salt until well combined.

3. Mix the wet ingredients
In a separate bowl, whisk together the Greek yogurt, eggs, melted butter, milk, lemon juice, lemon zest, and vanilla extract until smooth and creamy.

4. Combine the batter
Pour the wet ingredients into the dry ingredients and gently stir until just combined. Be careful not to overmix. The batter should be thick and a little lumpy.

5. Fold in the blueberries
Gently fold in the blueberries with a spatula, being careful not to crush them. If you are using frozen blueberries, add them straight from the freezer.

6. Fill the muffin pan
Divide the batter evenly between the muffin cups, filling each one about ¾ full. For a bakery-style look, press a few extra blueberries onto the tops of each muffin and some course sugar.

7. Bake
Bake for 18–22 minutes, or until the tops are lightly golden and a toothpick inserted into the center comes out clean.
8. Cool & Drizzle with lemon glaze (optional)
Once the muffins are mostly cooled, drizzle the simple lemon glaze over the tops for a fresh, sweet finish.

Recipe Tips
Don’t Overmix the Batter: Gently stir until just combined—overmixing can make the muffins dense instead of soft and fluffy.
Use Fresh Lemon Zest (Don’t Skip It!): The zest is where most of the lemon flavor comes from and really brings these muffins to life.
Toss Blueberries in Flour: Lightly coating the blueberries in flour helps keep them from sinking to the bottom especially if you are using frozen blueberries.
Use Thick Greek Yogurt: A thicker yogurt creates a richer, more tender muffin. If yours is thin, strain it slightly.
Add Extra Blueberries on Top: Press a few blueberries onto each muffin before baking for that beautiful, bakery-style look.
Don’t Overbake: Start checking around 18 minutes—overbaking can dry them out. You want just lightly golden tops.
Let Them Cool Slightly Before Glazing: If they’re too hot, the glaze will melt right off instead of sitting nicely on top.
How to Store Blueberry Lemon Muffins
At Room Temperature
Store the muffins in an airtight container at room temperature for up to 2 days. Line the container with a paper towel to absorb moisture and keep the tops from getting sticky.
In the Refrigerator
Store in an airtight container for up to 5 days. Because of the Greek yogurt, refrigeration helps keep them fresh longer—just warm slightly before serving for the best texture.
In the Freezer
Let muffins cool completely, then place in a freezer-safe bag or container and freeze for up to 3 months.
How to Reheat
- Microwave for 15–25 seconds for a soft, warm muffin
- Or warm in a 300°F oven for 5–10 minutes for a fresh-baked feel
Serving Suggestions
- Serve alongside scrambled or fried eggs for a more filling, protein-rich start to the day.
- These muffins are perfect with a warm cup of coffee, tea, or a homemade hot chocolate for a cozy afternoon break.
- Slice in half and spread with butter or a light drizzle of honey for an extra comforting touch.
- Pair with a bowl of Greek yogurt and fresh fruit for a simple, nourishing breakfast plate.
- Make a Simple Breakfast Board by serving muffins with berries, yogurt, boiled eggs, and honey or nut butter.

Frequently Asked Questions
More Sweet Treats You’ll Love

Blueberry Lemon Muffins with Greek Yogurt
Ingredients
- 1 ¾ cups all-purpose flour
- ½ cup brown sugar
- 1 teaspoon baking powder
- ½ teaspoon baking soda
- ½ teaspoon salt
- 1 cup plain Greek yogurt
- 2 large eggs
- ¼ cup melted butter
- ⅓ cup milk
- ¼ cup fresh lemon juice
- 1 tablespoon lemon zest
- 1 teaspoon vanilla extract
- 1 cup blueberries fresh or frozen
Optional Topping:
- 1 tablespoon coarse sugar
Optional Lemon Glaze:
- 1 cup powdered sugar
- 1-2 tablespoons lemon juice
- ½ teaspoon lemon zest
- milk if needed to thin
Instructions
- Preheat oven to 375°F and line a 12-cup muffin pan with liners.
- In a large bowl, whisk together flour, sugar, baking powder, baking soda, and salt.
- In a separate bowl, whisk together Greek yogurt, eggs, melted butter or oil, milk, lemon juice, lemon zest, and vanilla extract until smooth.
- Pour the wet ingredients into the dry ingredients and stir gently until just combined. Do not overmix.
- Fold in the blueberries.
- Divide the batter evenly into muffin cups, filling about ¾ full.
- Press a few extra blueberries on top and sprinkle with coarse sugar if desired.
- Bake for 18–22 minutes, or until lightly golden and a toothpick inserted comes out clean.
- Cool for 5 minutes, then transfer to a wire rack.
- Drizzle with lemon glaze once slightly cooled, if desired.
Notes
- Do not overmix to keep muffins soft and fluffy.
- Toss blueberries in a little flour to prevent sinking.
- For best flavor, do not skip the lemon zest.
- Store at room temperature for 2 days or refrigerate up to 5 days.
Did you make this recipe?
I’d love to see! Tag @simplychelseahome on Instagram and leave a comment below!!
